Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter atp-binding protein | NQ490_07830 | P54537 | + | 1637094 - 1637834 | 27009.9 |
| transporter substrate-binding domain-containing protein | NQ490_07835 | P0AEN0 | + | 1638003 - 1638863 | 29659.3 |
| amino acid abc transporter permease | NQ490_07840 | P42200 | + | 1638863 - 1639522 | 24122.3 |
| amino acid abc transporter atp-binding protein | NQ490_07845 | P37774 | + | 1639536 - 1640318 | 28508.3 |
| thioredoxin | NQ490_07850 | Q2FHT6 | - | 1640922 - 1641233 | 11239.6 |
| nad(p)/fad-dependent oxidoreductase | NQ490_07855 | O66790 | - | 1641240 - 1642112 | 30146.0 |
| carboxypeptidase m32 | NQ490_07860 | P50848 | - | 1642212 - 1643702 | 56416.6 |
| glycosyltransferase | NQ490_07865 | P71057 | + | 1643835 - 1644695 | 32823.1 |
| zinc ribbon domain-containing protein | NQ490_07870 | Not Available | + | 1644725 - 1645699 | 35370.6 |
| hypothetical protein | NQ490_07875 | Not Available | + | 1645876 - 1646418 | 20252.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.