Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3237 domain-containing protein | NQ490_07780 | Q97DZ9 | + | 1628428 - 1628835 | 14549.4 |
| pyridoxamine 5'-phosphate oxidase family protein | NQ490_07785 | Not Available | - | 1628898 - 1629371 | 17419.9 |
| sigma-70 family rna polymerase sigma factor | NQ490_07790 | H8F0N6 | + | 1629545 - 1630030 | 18732.4 |
| hypothetical protein | NQ490_07795 | Not Available | + | 1630027 - 1630779 | 26981.9 |
| abc transporter atp-binding protein | NQ490_07800 | P94374 | + | 1630795 - 1631667 | 31735.1 |
| hypothetical protein | NQ490_07805 | Not Available | + | 1631664 - 1632869 | 42211.1 |
| hypothetical protein | NQ490_07810 | Not Available | + | 1632883 - 1634103 | 44581.3 |
| cytidylate kinase-like family protein | NQ490_07815 | Not Available | + | 1634618 - 1635208 | 22733.2 |
| transporter substrate-binding domain-containing protein | NQ490_07820 | P0AEQ5 | + | 1635419 - 1636255 | 28829.5 |
| amino acid abc transporter permease | NQ490_07825 | P0AEQ8 | + | 1636427 - 1637101 | 24444.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.