Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| patatin family protein | NQ490_07680 | P39407 | - | 1610717 - 1611538 | 30699.9 |
| rrf2 family transcriptional regulator | NQ490_07685 | P71036 | - | 1611615 - 1612055 | 16261.7 |
| nad-dependent protein deacetylase | NQ490_07690 | P0DN71 | + | 1612163 - 1613083 | 35566.4 |
| nad-dependent protein deacetylase, sir2 family | NQ490_07695 | P0DN71 | + | 1613061 - 1613942 | 33762.3 |
| nad-dependent protein deacetylase, sir2 family | NQ490_07700 | P0DN71 | + | 1613935 - 1614792 | 31967.6 |
| cggc domain-containing protein | NQ490_07705 | Q58002 | + | 1614901 - 1615251 | 12584.3 |
| metalloregulator arsr/smtb family transcription factor | NQ490_07710 | Q55940 | + | 1615305 - 1615676 | 14041.2 |
| helix-turn-helix transcriptional regulator | NQ490_07715 | P35319 | + | 1615689 - 1616792 | 41439.5 |
| murr/rpir family transcriptional regulator | NQ490_07720 | Q8RD36 | + | 1616761 - 1617621 | 32603.2 |
| 6-phospho-beta-glucosidase | NQ490_07725 | P46320 | + | 1617824 - 1619212 | 51951.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.