Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | NQ490_07430 | O35005 | + | 1551345 - 1552757 | 51416.4 |
| alpha/beta hydrolase | NQ490_07435 | O06734 | + | 1552970 - 1553911 | 32894.9 |
| sodium ion-translocating decarboxylase subunit beta | NQ490_07440 | O54031 | - | 1554294 - 1555484 | 41823.6 |
| oadg family transporter subunit | NQ490_07445 | Not Available | - | 1555497 - 1555907 | 13978.3 |
| lta synthase family protein | NQ490_07450 | P72302 | + | 1556171 - 1558045 | 69372.3 |
| nitroreductase family protein | NQ490_07455 | P39605 | - | 1558388 - 1559131 | 27760.0 |
| polysaccharide biosynthesis c-terminal domain-containing protein | NQ490_07460 | Not Available | - | 1559136 - 1560569 | 53487.9 |
| m48 family metallopeptidase | NQ490_07465 | Not Available | - | 1560598 - 1561158 | 20453.7 |
| arac family transcriptional regulator | NQ490_07470 | A7FN80 | - | 1561229 - 1562098 | 33435.9 |
| mannitol dehydrogenase family protein | NQ490_07475 | Q9WXS3 | + | 1562275 - 1563888 | 59022.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.