Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ490_07280 | Not Available | - | 1521024 - 1521350 | 12025.3 |
| trypsin-like peptidase domain-containing protein | NQ490_07285 | O22609 | - | 1521357 - 1522682 | 46407.1 |
| spoiie family protein phosphatase | NQ490_07290 | O34779 | - | 1522682 - 1523614 | 34510.4 |
| fha domain-containing protein | NQ490_07295 | Not Available | - | 1523618 - 1524157 | 19143.6 |
| hypothetical protein | NQ490_07300 | Not Available | - | 1524342 - 1524680 | 12958.0 |
| hypothetical protein | NQ490_07305 | Not Available | + | 1524731 - 1524970 | 8992.07 |
| hypothetical protein | NQ490_07310 | Not Available | + | 1525371 - 1525886 | 18535.6 |
| luxr c-terminal-related transcriptional regulator | NQ490_07315 | Not Available | + | 1526178 - 1527629 | 53260.6 |
| hypothetical protein | NQ490_07320 | Not Available | + | 1527649 - 1528098 | 16986.9 |
| sigma-70 family rna polymerase sigma factor | NQ490_07325 | Not Available | - | 1528258 - 1528728 | 18453.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.