Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf370 domain-containing protein | NQ490_07130 | P37525 | + | 1485387 - 1485647 | 9539.19 |
| dna topoisomerase (atp-hydrolyzing) subunit b | NQ490_07135 | Q9X3Y6 | + | 1485723 - 1487711 | 73126.3 |
| dna gyrase subunit a | NQ490_07140 | P94605 | + | 1488105 - 1490675 | 94690.2 |
| duf3991 and toprim domain-containing protein | NQ490_07145 | Not Available | + | 1491280 - 1492131 | 32244.5 |
| yodl domain-containing protein | NQ490_07150 | Not Available | + | 1492165 - 1493058 | 34214.3 |
| hypothetical protein | NQ490_07155 | Not Available | - | 1493109 - 1493516 | 13808.8 |
| tnpv protein | NQ490_07160 | Not Available | + | 1493869 - 1494207 | 13041.0 |
| dead/deah box helicase family protein | NQ490_07165 | Q71TF8 | + | 1494288 - 1500272 | 224255.0 |
| hypothetical protein | NQ490_07170 | Not Available | + | 1500346 - 1500621 | 10379.2 |
| cap domain-containing protein | NQ490_07175 | O31398 | + | 1500633 - 1501355 | 25063.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.