Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aipr family protein | NQ490_06980 | Not Available | + | 1454244 - 1456358 | 79690.4 |
| dna cytosine methyltransferase | NQ490_06985 | P05302 | + | 1456379 - 1458076 | 64247.8 |
| is200/is605 family transposase | NQ490_06990 | Q9JWD6 | + | 1458015 - 1458221 | 8169.99 |
| is21-like element helper atpase istb | NQ490_06995 | P55923 | - | 1458354 - 1459094 | 28226.9 |
| is21 family transposase | NQ490_07000 | Q51649 | - | 1459097 - 1460635 | 58621.9 |
| methionyl-trna formyltransferase | NQ490_07005 | Not Available | + | 1461024 - 1461263 | 9343.12 |
| Trna-arg | Not Available | Not Available | + | 1461509 - 1461585 | Not Available |
| alpha/beta hydrolase | NQ490_07015 | P54567 | + | 1462060 - 1463043 | 35208.0 |
| patatin family protein | NQ490_07020 | P39407 | - | 1463095 - 1463967 | 32409.1 |
| type i 3-dehydroquinate dehydratase | NQ490_07025 | P58687 | + | 1464103 - 1464831 | 25327.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.