Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | NQ490_06880 | P94530 | + | 1427944 - 1428789 | 31422.6 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | NQ490_06885 | P15885 | + | 1428894 - 1431338 | 86331.1 |
| crp/fnr family transcriptional regulator | NQ490_06890 | P51007 | - | 1432217 - 1432906 | 25855.6 |
| hd domain-containing protein | NQ490_06895 | Not Available | + | 1433076 - 1433606 | 20083.0 |
| pyridoxamine kinase | NQ490_06900 | B1LML3 | + | 1433590 - 1434438 | 30980.3 |
| tigr04076 family protein | NQ490_06905 | Not Available | + | 1434425 - 1434694 | 9984.06 |
| aspartate aminotransferase family protein | NQ490_06910 | Q9PIR7 | + | 1434696 - 1435871 | 42885.1 |
| helix-turn-helix domain-containing protein | NQ490_06915 | Not Available | + | 1436459 - 1436917 | 17391.7 |
| hipa domain-containing protein | NQ490_06920 | Q9ZKJ5 | + | 1436921 - 1437826 | 34646.8 |
| helicase repa family protein | NQ490_06925 | P74391 | + | 1438422 - 1439480 | 38313.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.