Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase | NQ490_06730 | Q88JU3 | - | 1384535 - 1385380 | 31337.3 |
| shikimate kinase | NQ490_06735 | A5FRZ4 | - | 1385416 - 1385937 | 19109.1 |
| mfs transporter | NQ490_06740 | P76198 | - | 1385942 - 1386607 | 23490.6 |
| helix-turn-helix transcriptional regulator | NQ490_06745 | Not Available | + | 1386594 - 1386863 | 10238.5 |
| extracellular solute-binding protein | NQ490_06750 | Not Available | - | 1386944 - 1387849 | 33128.4 |
| carbohydrate abc transporter permease | NQ490_06755 | P94530 | - | 1387919 - 1388764 | 30729.7 |
| sugar abc transporter permease | NQ490_06760 | P29823 | - | 1388768 - 1389700 | 34769.2 |
| hypothetical protein | NQ490_06765 | Not Available | - | 1389779 - 1391332 | 57191.6 |
| hypothetical protein | NQ490_06770 | Not Available | - | 1391250 - 1392782 | 56413.8 |
| cellobiose phosphorylase | NQ490_06775 | Q8P3J4 | - | 1392804 - 1395455 | 96762.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.