Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ490_06630 | Not Available | - | 1364466 - 1364666 | 7313.01 |
| carbohydrate kinase | NQ490_06635 | Q9SID0 | - | 1364709 - 1365659 | 33439.9 |
| gh32 c-terminal domain-containing protein | NQ490_06640 | P16553 | - | 1365672 - 1367141 | 55362.4 |
| extracellular solute-binding protein | NQ490_06645 | A0A0H2URD6 | - | 1367207 - 1368814 | 58993.1 |
| carbohydrate abc transporter permease | NQ490_06650 | P53561 | - | 1369037 - 1369927 | 33378.6 |
| abc transporter permease subunit | NQ490_06655 | P39128 | - | 1369944 - 1370870 | 33952.1 |
| laci family dna-binding transcriptional regulator | NQ490_06660 | P72469 | + | 1371126 - 1372151 | 37877.8 |
| hypothetical protein | NQ490_06665 | Not Available | - | 1372287 - 1372739 | 16946.9 |
| tetratricopeptide repeat protein | NQ490_06670 | Q8WWF6 | - | 1372802 - 1373782 | 37769.9 |
| hypothetical protein | NQ490_06675 | Not Available | - | 1373828 - 1374076 | 8768.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.