Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | NQ490_06530 | Not Available | - | 1347575 - 1348852 | 47020.9 |
| lyttr family dna-binding domain-containing protein | NQ490_06535 | Q82Z76 | - | 1348849 - 1349559 | 27152.8 |
| selenide, water dikinase seld | NQ490_06540 | Q73JP8 | + | 1349690 - 1350736 | 36803.2 |
| aminotransferase class v-fold plp-dependent enzyme | NQ490_06545 | O27442 | - | 1350723 - 1351874 | 40473.7 |
| yede family putative selenium transporter | NQ490_06550 | Not Available | + | 1351981 - 1353072 | 37071.9 |
| sulfurtransferase tusa family protein | NQ490_06555 | Q58397 | + | 1353069 - 1353278 | 7545.06 |
| duf3343 domain-containing protein | NQ490_06560 | P0DN74 | + | 1353275 - 1353520 | 9150.86 |
| selenium cofactor biosynthesis protein yqec | NQ490_06565 | Q46809 | + | 1353522 - 1354214 | 24205.3 |
| selenium-dependent molybdenum cofactor biosynthesis protein yqeb | NQ490_06570 | Q46808 | - | 1354240 - 1355088 | 29278.7 |
| molybdopterin-binding protein | NQ490_06575 | A0QGE9 | + | 1355167 - 1356192 | 36741.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.