Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4867 family protein | NQ490_05635 | Not Available | - | 1152076 - 1152717 | 22877.0 |
| xylulokinase | NQ490_05640 | P09099 | - | 1152746 - 1154230 | 53588.4 |
| rok family transcriptional regulator | NQ490_05645 | P94490 | + | 1154290 - 1155591 | 48563.8 |
| arac family transcriptional regulator | NQ490_05650 | Q52620 | + | 1155626 - 1156501 | 33501.2 |
| cysteine desulfurase | NQ490_05655 | B8DZS1 | - | 1156578 - 1157726 | 40845.2 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | NQ490_05660 | D5EY15 | - | 1157772 - 1159925 | 78894.6 |
| gdsl-type esterase/lipase family protein | NQ490_05665 | Not Available | - | 1159960 - 1161645 | 62180.7 |
| glycosyl hydrolase family 8 | NQ490_05670 | Q9KB30 | + | 1162185 - 1163345 | 44403.7 |
| alpha-n-arabinofuranosidase | NQ490_05675 | P94552 | + | 1163443 - 1164939 | 55207.1 |
| duf624 domain-containing protein | NQ490_05680 | Not Available | - | 1165013 - 1165705 | 25454.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.