Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ490_05585 | Not Available | - | 1144072 - 1144593 | 19841.7 |
| hypothetical protein | NQ490_05590 | Not Available | - | 1144663 - 1145184 | 19569.1 |
| hypothetical protein | NQ490_05595 | Not Available | + | 1145437 - 1146300 | 33300.9 |
| helix-turn-helix transcriptional regulator | NQ490_05600 | Not Available | + | 1146297 - 1146566 | 10393.5 |
| ribulose-phosphate 3-epimerase | NQ490_05605 | Q58093 | - | 1146996 - 1147643 | 22593.6 |
| ribose 5-phosphate isomerase b | NQ490_05610 | P39156 | - | 1147643 - 1148074 | 15262.3 |
| transketolase family protein | NQ490_05615 | Q58092 | - | 1148076 - 1149014 | 32998.7 |
| transketolase | NQ490_05620 | Q58094 | - | 1149011 - 1149862 | 31042.9 |
| fructose-6-phosphate aldolase | NQ490_05625 | C4ZF71 | - | 1149864 - 1150523 | 23554.4 |
| fucose isomerase | NQ490_05630 | Not Available | - | 1150549 - 1152039 | 54801.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.