Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | NQ490_05385 | O33817 | + | 1098315 - 1098734 | 15898.0 |
| mate family efflux transporter | NQ490_05390 | Q4L8N9 | - | 1099049 - 1100377 | 46930.2 |
| winged helix-turn-helix transcriptional regulator | NQ490_05395 | P67748 | - | 1100374 - 1100826 | 16426.7 |
| transketolase family protein | NQ490_05400 | Q58092 | - | 1101017 - 1101955 | 33013.6 |
| transketolase | NQ490_05405 | Q58094 | - | 1101952 - 1102803 | 31062.9 |
| fructose-6-phosphate aldolase | NQ490_05410 | C4ZF71 | - | 1102805 - 1103464 | 23626.5 |
| fucose isomerase | NQ490_05415 | Not Available | - | 1103489 - 1104979 | 54574.3 |
| duf4867 family protein | NQ490_05420 | Not Available | - | 1105001 - 1105636 | 22453.6 |
| hypothetical protein | NQ490_05425 | O34927 | - | 1105648 - 1106322 | 23773.3 |
| hypothetical protein | NQ490_05430 | Not Available | - | 1106319 - 1106555 | 8478.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.