Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin family protein | NQ490_05335 | O26981 | - | 1090761 - 1091057 | 10177.3 |
| permease | NQ490_05340 | P45468 | - | 1091076 - 1092077 | 35315.5 |
| metalloregulator arsr/smtb family transcription factor | NQ490_05345 | Q58721 | - | 1092155 - 1092466 | 11339.8 |
| choloylglycine hydrolase | NQ490_05350 | Q06115 | + | 1092618 - 1093592 | 35617.2 |
| hypothetical protein | NQ490_05355 | A3DBH1 | - | 1093636 - 1094397 | 27037.4 |
| rna polymerase sigma factor | NQ490_05360 | O05404 | - | 1094390 - 1094869 | 18171.7 |
| hypothetical protein | NQ490_05365 | Not Available | - | 1094891 - 1095205 | 10749.4 |
| pepsy domain-containing protein | NQ490_05370 | Q5XAJ8 | - | 1095377 - 1096054 | 23782.9 |
| hamp domain-containing histidine kinase | NQ490_05375 | P0A4I7 | - | 1096131 - 1097495 | 49879.2 |
| response regulator transcription factor | NQ490_05380 | Q02540 | - | 1097492 - 1098166 | 24863.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.