Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha-galactosidase | NQ490_05285 | G4T4R7 | + | 1076772 - 1079018 | 83863.0 |
| alpha-amylase family glycosyl hydrolase | NQ490_05290 | Q9ZEU2 | + | 1079040 - 1081289 | 85028.6 |
| beta-galactosidase | NQ490_05295 | Q9K9C6 | - | 1081363 - 1084152 | 104104.0 |
| terminase small subunit | NQ490_05300 | Not Available | + | 1084397 - 1084588 | 6695.97 |
| pbsx family phage terminase large subunit | NQ490_05305 | P54308 | + | 1084601 - 1085845 | 46286.0 |
| duf6198 family protein | NQ490_05310 | O34927 | - | 1085902 - 1086561 | 23375.5 |
| peptidoglycan dd-metalloendopeptidase family protein | NQ490_05315 | P44693 | - | 1086647 - 1088554 | 69601.6 |
| blai/meci/copy family transcriptional regulator | NQ490_05320 | Not Available | - | 1088558 - 1088935 | 13359.0 |
| mfs transporter | NQ490_05325 | Q8K999 | - | 1089044 - 1090189 | 41340.8 |
| arsenate reductase arsc | NQ490_05330 | Q5HRI4 | - | 1090357 - 1090764 | 14733.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.