Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ490_05235 | Not Available | - | 1068178 - 1069386 | 43976.0 |
| hypothetical protein | NQ490_05240 | Not Available | - | 1069401 - 1070633 | 44193.4 |
| Trna-pro | Not Available | Not Available | + | 1070772 - 1070847 | Not Available |
| thioredoxin | NQ490_05250 | Q9CM49 | + | 1070985 - 1071299 | 11556.1 |
| rhodanese-like domain-containing protein | NQ490_05255 | D3RPB9 | + | 1071303 - 1071623 | 11294.5 |
| crp/fnr family transcriptional regulator | NQ490_05260 | P23926 | - | 1071682 - 1072341 | 24991.0 |
| arac family transcriptional regulator | NQ490_05265 | Q00753 | - | 1072387 - 1073271 | 34029.3 |
| sugar abc transporter substrate-binding protein | NQ490_05270 | O31518 | + | 1073612 - 1074874 | 46763.0 |
| sugar abc transporter permease | NQ490_05275 | O51924 | + | 1074874 - 1075758 | 33033.0 |
| carbohydrate abc transporter permease | NQ490_05280 | Q9KEE9 | + | 1075762 - 1076598 | 30763.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.