Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tatd family hydrolase | NQ490_05085 | P37545 | - | 1028538 - 1029332 | 29247.5 |
| dmt family transporter | NQ490_05090 | O32256 | - | 1029336 - 1030280 | 33184.6 |
| methionine--trna ligase | NQ490_05095 | Q8XHG1 | - | 1030300 - 1032312 | 75374.1 |
| amino acid racemase | NQ490_05100 | O58403 | - | 1032344 - 1033036 | 24739.7 |
| hypothetical protein | NQ490_05105 | Not Available | + | 1033279 - 1034820 | 58098.3 |
| ribonuclease y | NQ490_05110 | B0TII8 | - | 1034926 - 1036479 | 57748.5 |
| abc transporter atp-binding protein/permease | NQ490_05115 | P63398 | - | 1036805 - 1038616 | 66492.7 |
| abc transporter atp-binding protein/permease | NQ490_05120 | P9WQJ0 | - | 1038618 - 1040837 | 80372.4 |
| marr family transcriptional regulator | NQ490_05125 | B0FXI7 | - | 1040821 - 1041336 | 18896.9 |
| lrp/asnc family transcriptional regulator | NQ490_05130 | P96653 | + | 1041767 - 1042198 | 15806.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.