Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | NQ490_04885 | Q59160 | + | 976750 - 978012 | 44410.2 |
| duf1667 domain-containing protein | NQ490_04890 | Not Available | + | 978017 - 978382 | 12253.2 |
| wecb/taga/cpsf family glycosyltransferase | NQ490_04895 | P27620 | + | 978463 - 979212 | 28730.4 |
| aldose epimerase | NQ490_04900 | P42096 | - | 979271 - 980143 | 31769.4 |
| glucuronate isomerase | NQ490_04905 | C4Z5P8 | + | 980446 - 981888 | 54687.4 |
| anaerobic ribonucleoside-triphosphate reductase activating protein | NQ490_04910 | Q9CM94 | - | 981977 - 982525 | 21014.9 |
| anaerobic ribonucleoside-triphosphate reductase | NQ490_04915 | P43752 | + | 982949 - 985171 | 83941.4 |
| iron-containing alcohol dehydrogenase | NQ490_04920 | A6ZTT5 | + | 985429 - 986676 | 44611.7 |
| aldehyde dehydrogenase | NQ490_04925 | P39616 | + | 986633 - 988012 | 50483.3 |
| hypothetical protein | NQ490_04930 | Not Available | - | 988145 - 991240 | 105172.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.