Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dj-1/pfpi family protein | NQ490_04440 | Q9VA37 | + | 875126 - 875680 | 18760.6 |
| methylglyoxal synthase | NQ490_04445 | Q8EQD4 | - | 875729 - 876133 | 14668.0 |
| ricin domain-containing protein | NQ490_04450 | Not Available | + | 876393 - 876986 | 21726.8 |
| dead/deah box helicase | NQ490_04455 | Q81DF9 | + | 877100 - 878287 | 44411.6 |
| hamp domain-containing histidine kinase | NQ490_04460 | P94414 | - | 878337 - 879770 | 51605.8 |
| response regulator transcription factor | NQ490_04465 | P35163 | - | 879767 - 880453 | 26293.7 |
| redox-regulated atpase ychf | NQ490_04470 | P37518 | + | 880634 - 881764 | 40855.5 |
| 5'-methylthioadenosine/adenosylhomocysteine nucleosidase | NQ490_04475 | Q0HG72 | + | 881778 - 882461 | 23994.1 |
| duf523 domain-containing protein | NQ490_04480 | Q45584 | - | 882511 - 882945 | 15576.8 |
| hypothetical protein | NQ490_04485 | Not Available | - | 883014 - 883445 | 16069.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.