Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypc/hybg/hupf family hydrogenase formation chaperone | NQ490_04290 | Q57653 | + | 842135 - 842359 | 7755.51 |
| hydrogenase formation protein hypd | NQ490_04295 | P31904 | + | 842349 - 843464 | 38826.8 |
| hydrogenase expression/formation protein hype | NQ490_04300 | P40599 | + | 843485 - 844486 | 33932.1 |
| sigma-70 family rna polymerase sigma factor | NQ490_04305 | P62182 | - | 844496 - 844939 | 15960.3 |
| mbl fold metallo-hydrolase | NQ490_04310 | Q60BX0 | - | 845048 - 845926 | 32920.4 |
| lysr family transcriptional regulator | NQ490_04315 | P0ACR6 | - | 846021 - 846899 | 31870.4 |
| chromate transporter | NQ490_04320 | O05216 | + | 847016 - 847603 | 20874.0 |
| chromate transporter | NQ490_04325 | O05215 | + | 847600 - 848166 | 20174.6 |
| efr1 family ferrodoxin | NQ490_04330 | Not Available | + | 848304 - 849035 | 26548.8 |
| flavin reductase family protein | NQ490_04335 | Q9KIT1 | - | 849088 - 849648 | 19928.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.