Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| holliday junction branch migration protein ruva | NQ490_04140 | Q1GWB4 | - | 813175 - 813780 | 20460.8 |
| crossover junction endodeoxyribonuclease ruvc | NQ490_04145 | C0ZAN2 | - | 813816 - 814313 | 18354.4 |
| Trna-val | Not Available | Not Available | + | 814522 - 814597 | Not Available |
| hemolysin family protein | NQ490_04155 | Q84R21 | - | 814704 - 816023 | 48658.8 |
| hypothetical protein | NQ490_04160 | Not Available | + | 816295 - 818055 | 64045.1 |
| hypothetical protein | NQ490_04165 | P42377 | + | 818078 - 820420 | 85182.8 |
| phosphatase pap2 family protein | NQ490_04170 | Not Available | + | 820700 - 821380 | 26607.1 |
| imidazolonepropionase | NQ490_04175 | Not Available | + | 821487 - 821801 | 12445.3 |
| is3 family transposase | NQ490_04180 | P19769 | + | 821822 - 822658 | 33196.0 |
| eama family transporter | NQ490_04185 | Not Available | - | 822747 - 823094 | 12796.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.