Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type i glyceraldehyde-3-phosphate dehydrogenase | NQ490_04040 | Q59309 | - | 790975 - 792003 | 36747.1 |
| hypothetical protein | NQ490_04045 | Not Available | + | 792229 - 792828 | 20740.4 |
| hypothetical protein | NQ490_04050 | Not Available | - | 792861 - 793691 | 29423.1 |
| spoiid/lytb domain-containing protein | NQ490_04055 | P07372 | + | 793822 - 794817 | 34922.8 |
| fructose-specific pts transporter subunit eiic | NQ490_04060 | P71012 | - | 794851 - 796728 | 65328.2 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | NQ490_04065 | P94360 | - | 796807 - 797919 | 41482.5 |
| arac family transcriptional regulator | NQ490_04070 | O31522 | + | 798041 - 798814 | 27160.0 |
| udp-glucose 4-epimerase gale | NQ490_04075 | P55180 | - | 798871 - 799896 | 37375.3 |
| arac family transcriptional regulator | NQ490_04080 | Not Available | - | 799968 - 800903 | 35230.4 |
| hypothetical protein | NQ490_04085 | Not Available | - | 800917 - 801909 | 36173.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.