Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase | NQ490_03990 | Not Available | - | 782247 - 783035 | 28874.3 |
| sugar nucleotide-binding protein | NQ490_03995 | Not Available | - | 783022 - 783966 | 34791.2 |
| imidazole glycerol phosphate synthase subunit hish | NQ490_04000 | Q5WYE9 | - | 784066 - 784713 | 22771.3 |
| imidazole glycerol phosphate synthase cyclase subunit | NQ490_04005 | Q9RDX2 | - | 784710 - 785477 | 27772.4 |
| n-acetyl sugar amidotransferase | NQ490_04010 | Q58994 | - | 785502 - 786875 | 53653.9 |
| dabb family protein | NQ490_04015 | Not Available | - | 787015 - 787317 | 10840.1 |
| hypothetical protein | NQ490_04020 | Not Available | - | 787314 - 787532 | 8241.8 |
| n-acetyl sugar amidotransferase | NQ490_04025 | Not Available | - | 787536 - 788654 | 43338.4 |
| duf362 domain-containing protein | NQ490_04030 | P73695 | + | 788867 - 789973 | 39879.7 |
| sialate o-acetylesterase | NQ490_04035 | Not Available | - | 790039 - 790806 | 27871.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.