Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methylglyoxal synthase | NQ490_03490 | B9MRV5 | + | 677081 - 677485 | 14918.1 |
| zf-hc2 domain-containing protein | NQ490_03495 | O07628 | - | 677541 - 678269 | 28012.1 |
| sigma-70 family rna polymerase sigma factor | NQ490_03500 | O07627 | - | 678266 - 678754 | 18943.6 |
| pyridoxamine 5'-phosphate oxidase family protein | NQ490_03505 | Not Available | - | 678877 - 679287 | 15422.4 |
| ll-diaminopimelate aminotransferase | NQ490_03510 | Q18T09 | - | 679309 - 680496 | 43831.8 |
| hypothetical protein | NQ490_03515 | Not Available | - | 680582 - 682261 | 62274.2 |
| diaminopimelate epimerase | NQ490_03520 | B0C312 | - | 682334 - 683182 | 29781.6 |
| acyl carrier protein | NQ490_03525 | O67611 | + | 683331 - 683567 | 8867.15 |
| proline--trna ligase | NQ490_03530 | A0Q2I3 | + | 683599 - 685038 | 54079.7 |
| hypothetical protein | NQ490_03535 | Not Available | + | 685092 - 686174 | 38646.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.