Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ490_11780 | Not Available | + | 2512526 - 2513776 | 47262.7 |
| duf6320 domain-containing protein | NQ490_11785 | Not Available | + | 2513773 - 2514453 | 25703.4 |
| prephenate dehydrogenase | NQ490_11790 | P20692 | - | 2514488 - 2515342 | 31824.2 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | NQ490_11795 | A6M254 | - | 2515361 - 2516644 | 45777.0 |
| 3-deoxy-7-phosphoheptulonate synthase | NQ490_11800 | Q9WYH8 | - | 2516647 - 2517663 | 36845.5 |
| shikimate dehydrogenase | NQ490_11805 | Q0SV31 | - | 2517698 - 2518957 | 45545.9 |
| chorismate synthase | NQ490_11810 | E3PV41 | - | 2518964 - 2520094 | 39523.1 |
| 3-dehydroquinate synthase | NQ490_11815 | Q03LH4 | - | 2520139 - 2521164 | 37378.6 |
| chorismate mutase | NQ490_11820 | Q9SSE7 | - | 2521190 - 2522296 | 40167.9 |
| had hydrolase-like protein | NQ490_11825 | Not Available | - | 2522398 - 2523240 | 30919.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.