Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pfl family protein | NQ490_11630 | A0AFY0 | - | 2486902 - 2488269 | 46930.4 |
| act domain-containing protein | NQ490_11635 | Q8Y9J4 | - | 2488290 - 2488559 | 9789.15 |
| degv family protein | NQ490_11640 | Q8R9U5 | - | 2488677 - 2489579 | 33068.7 |
| trna (cytidine(34)-2'-o)-methyltransferase | NQ490_11645 | P32813 | - | 2489576 - 2490085 | 19312.1 |
| pyridoxamine kinase | NQ490_11650 | O14242 | - | 2490126 - 2490956 | 28535.9 |
| hypothetical protein | NQ490_11655 | Not Available | + | 2491137 - 2491310 | 6158.68 |
| phosphoglycerate dehydrogenase | NQ490_11660 | Q5R7M2 | - | 2491361 - 2492521 | 40736.3 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | NQ490_11665 | B8FLC3 | - | 2492543 - 2493640 | 40523.5 |
| blai/meci/copy family transcriptional regulator | NQ490_11670 | O07127 | + | 2493975 - 2494367 | 15214.3 |
| tigr03915 family putative dna repair protein | NQ490_11675 | Not Available | - | 2494358 - 2495140 | 29904.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.