Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | NQ490_11580 | Not Available | - | 2479780 - 2480022 | 9673.76 |
| duf378 domain-containing protein | NQ490_11585 | O32087 | + | 2480590 - 2480811 | 7912.94 |
| ftsw/roda/spove family cell cycle protein | NQ490_11590 | P07373 | - | 2480843 - 2482006 | 41360.7 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | NQ490_11595 | O05515 | + | 2482143 - 2482556 | 15065.7 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | NQ490_11600 | Q87RD1 | + | 2482610 - 2483323 | 25251.3 |
| ribose 5-phosphate isomerase b | NQ490_11605 | P39156 | + | 2483313 - 2483765 | 15987.2 |
| uracil phosphoribosyltransferase | NQ490_11610 | B0K7G1 | + | 2483827 - 2484456 | 22795.9 |
| crp/fnr family transcriptional regulator | NQ490_11615 | P29284 | - | 2484517 - 2485188 | 24604.9 |
| 4fe-4s binding protein | NQ490_11620 | O30082 | + | 2485280 - 2486005 | 25687.0 |
| carboxymuconolactone decarboxylase family protein | NQ490_11625 | P29911 | + | 2486082 - 2486846 | 27556.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.