Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | NQ490_11530 | Not Available | - | 2470622 - 2471044 | 16403.8 |
| class i sam-dependent methyltransferase | NQ490_11535 | B0RCZ0 | - | 2471216 - 2471983 | 29580.5 |
| tetracycline resistance ribosomal protection protein tet(w) | NQ490_11540 | O52836 | - | 2472034 - 2473953 | 71299.1 |
| is200/is605 family transposase | NQ490_11545 | Not Available | - | 2474605 - 2474733 | 4462.38 |
| type iv secretory system conjugative dna transfer family protein | NQ490_11550 | P18594 | - | 2474950 - 2476779 | 68307.4 |
| pcfb family protein | NQ490_11555 | Not Available | - | 2476776 - 2477276 | 19232.2 |
| is200/is605 family transposase | NQ490_11560 | Not Available | - | 2477364 - 2477648 | 10926.2 |
| duf5720 family protein | NQ490_11565 | Not Available | - | 2477690 - 2477968 | 10944.2 |
| parb/repb/spo0j family partition protein | NQ490_11570 | Q72H91 | - | 2477982 - 2478917 | 35628.6 |
| para family protein | NQ490_11575 | P37522 | - | 2478874 - 2479695 | 29615.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.