Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ490_11380 | Not Available | + | 2441034 - 2441330 | 10547.5 |
| anti-sigma factor | NQ490_11385 | Not Available | + | 2441341 - 2441832 | 17551.5 |
| sigma-70 family rna polymerase sigma factor | NQ490_11390 | Not Available | + | 2442281 - 2442706 | 16592.9 |
| helix-turn-helix domain-containing protein | NQ490_11395 | Not Available | + | 2442967 - 2443161 | 7354.9 |
| response regulator transcription factor | NQ490_11400 | O07130 | + | 2443158 - 2443850 | 26247.7 |
| hamp domain-containing histidine kinase | NQ490_11405 | P45608 | + | 2443859 - 2444896 | 38583.7 |
| abc transporter atp-binding protein | NQ490_11410 | Q58206 | + | 2444970 - 2445653 | 25169.4 |
| abc transporter permease | NQ490_11415 | O53900 | + | 2445650 - 2447467 | 65522.2 |
| transglycosylase domain-containing protein | NQ490_11420 | Q07259 | + | 2447509 - 2448210 | 26434.8 |
| abc transporter atp-binding protein | NQ490_11425 | Q58903 | + | 2448642 - 2449325 | 25075.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.