Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is110 family transposase | NQ490_11330 | Q45968 | - | 2431892 - 2433136 | 46779.1 |
| hypothetical protein | NQ490_11335 | Not Available | + | 2433449 - 2434033 | 20910.2 |
| hypothetical protein | NQ490_11340 | Not Available | + | 2434059 - 2434598 | 19641.0 |
| hypothetical protein | NQ490_11345 | Not Available | + | 2434619 - 2435023 | 15182.9 |
| vanz family protein | NQ490_11350 | Not Available | - | 2435388 - 2436512 | 42867.4 |
| hamp domain-containing histidine kinase | NQ490_11355 | O34989 | - | 2436542 - 2437915 | 51066.5 |
| response regulator transcription factor | NQ490_11360 | P94504 | - | 2437920 - 2438621 | 25847.5 |
| abc transporter atp-binding protein | NQ490_11365 | P42332 | + | 2438763 - 2439527 | 27938.0 |
| abc transporter permease | NQ490_11370 | Not Available | + | 2439524 - 2440249 | 26465.1 |
| abc transporter permease | NQ490_11375 | Q5WNX1 | + | 2440265 - 2441029 | 28261.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.