Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cd1845 family protein | NQ490_11280 | Not Available | + | 2424741 - 2425052 | 10968.2 |
| type iv toxin-antitoxin system abiei family antitoxin domain-containing protein | NQ490_11285 | Not Available | + | 2425154 - 2425747 | 22754.5 |
| nucleotidyl transferase abieii/abigii toxin family protein | NQ490_11290 | Not Available | + | 2425744 - 2426592 | 31766.3 |
| hypothetical protein | NQ490_11295 | Not Available | + | 2426589 - 2426939 | 13790.4 |
| relaxase/mobilization nuclease domain-containing protein | NQ490_11300 | P03865 | + | 2426998 - 2428407 | 53339.5 |
| sigma-70 family rna polymerase sigma factor | NQ490_11305 | O05404 | + | 2428600 - 2429118 | 20030.3 |
| duf4367 domain-containing protein | NQ490_11310 | Not Available | + | 2429115 - 2429789 | 25349.0 |
| hypothetical protein | NQ490_11315 | Not Available | + | 2429869 - 2430222 | 12660.3 |
| c39 family peptidase | NQ490_11320 | Not Available | + | 2430312 - 2430872 | 20496.9 |
| hypothetical protein | NQ490_11325 | Not Available | + | 2430920 - 2431780 | 30964.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.