Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trag | NQ490_11230 | Not Available | + | 2407415 - 2408101 | 26388.5 |
| dna topoisomerase 3 | NQ490_11235 | Q65N90 | + | 2408082 - 2410184 | 77462.2 |
| immunoglobulin | NQ490_11240 | Not Available | + | 2410181 - 2410462 | 10704.9 |
| yodl domain-containing protein | NQ490_11245 | Q9RMV4 | + | 2410465 - 2413596 | 117841.0 |
| transposon-transfer assisting family protein | NQ490_11250 | Not Available | + | 2413598 - 2413813 | 8041.45 |
| tnpv protein | NQ490_11255 | Not Available | + | 2414663 - 2415019 | 13655.7 |
| snf2-related protein | NQ490_11260 | Q71TF8 | + | 2415079 - 2422887 | 292916.0 |
| duf3849 domain-containing protein | NQ490_11265 | Not Available | + | 2422889 - 2423956 | 40760.9 |
| plasmid mobilization relaxosome protein mobc | NQ490_11270 | Not Available | + | 2423953 - 2424297 | 13352.2 |
| hypothetical protein | NQ490_11275 | Not Available | + | 2424439 - 2424744 | 12169.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.