Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | + | 2392175 - 2392259 | Not Available |
| is200/is605 family transposase | NQ490_11135 | A4VGW3 | - | 2392297 - 2392488 | 6802.85 |
| para family protein | NQ490_11140 | P37522 | + | 2392792 - 2393613 | 29548.2 |
| parb/repb/spo0j family partition protein | NQ490_11145 | Q72H91 | + | 2393570 - 2394505 | 35844.9 |
| duf5720 family protein | NQ490_11150 | Not Available | + | 2394520 - 2394798 | 10876.1 |
| hypothetical protein | NQ490_11155 | Not Available | + | 2394829 - 2395014 | 7247.5 |
| helix-turn-helix domain-containing protein | NQ490_11160 | Not Available | + | 2395079 - 2395957 | 33511.6 |
| phage antirepressor | NQ490_11165 | Q91FN5 | + | 2395997 - 2396740 | 27873.7 |
| pcfb family protein | NQ490_11170 | Not Available | + | 2396827 - 2397327 | 19175.2 |
| type iv secretory system conjugative dna transfer family protein | NQ490_11175 | P18594 | + | 2397324 - 2399153 | 68440.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.