Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lcp family protein | NQ490_11080 | P52078 | + | 2379427 - 2381754 | 84592.2 |
| abc transporter substrate-binding protein | NQ490_11085 | Not Available | + | 2382363 - 2383226 | 29880.7 |
| abc transporter permease | NQ490_11090 | Q9ZDG1 | + | 2383310 - 2384227 | 31530.4 |
| atp-binding cassette domain-containing protein | NQ490_11095 | Q831K6 | + | 2384220 - 2385026 | 29305.7 |
| fad:protein fmn transferase | NQ490_11100 | O83774 | - | 2385067 - 2386119 | 37627.7 |
| duf3783 domain-containing protein | NQ490_11105 | Not Available | - | 2386116 - 2386523 | 14236.2 |
| preprotein translocase subunit seca | NQ490_11110 | A3DF88 | - | 2386589 - 2389459 | 107098.0 |
| dmt family transporter | NQ490_11115 | O33787 | - | 2389574 - 2390485 | 32839.2 |
| had hydrolase-like protein | NQ490_11120 | Q88QS2 | - | 2390478 - 2391140 | 24483.0 |
| quet transporter family protein | NQ490_11125 | A2RM05 | - | 2391157 - 2391759 | 21321.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.