Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein subunit alpha/fixb family protein | NQ490_10980 | G3KIM6 | + | 2355635 - 2356735 | 39455.6 |
| hypothetical protein | NQ490_10985 | Not Available | - | 2356859 - 2357500 | 22553.7 |
| 5-formyltetrahydrofolate cyclo-ligase | NQ490_10990 | A0R3H2 | - | 2357497 - 2358051 | 20104.7 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | NQ490_10995 | P37780 | + | 2358284 - 2358850 | 21284.0 |
| abc transporter permease | NQ490_11000 | Q50862 | + | 2358860 - 2359660 | 30851.1 |
| abc transporter atp-binding protein | NQ490_11005 | Q48479 | + | 2359673 - 2360449 | 28807.7 |
| glycosyltransferase family 2 protein | NQ490_11010 | P55465 | + | 2360457 - 2362328 | 70036.7 |
| kinase to dihydroxyacetone kinase | NQ490_11015 | Q7A5Z4 | + | 2362341 - 2362589 | 9281.93 |
| glycosyltransferase family 2 protein | NQ490_11020 | P55465 | + | 2362594 - 2364432 | 68596.0 |
| 2-hydroxyacyl-coa dehydratase | NQ490_11025 | Not Available | - | 2364491 - 2365813 | 48026.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.