Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | NQ490_10880 | P15435 | + | 2332827 - 2334044 | 46526.0 |
| site-specific integrase | NQ490_10885 | P15435 | + | 2334192 - 2335403 | 46128.8 |
| tyrosine-type recombinase/integrase | NQ490_10890 | Q8TZV9 | - | 2335791 - 2336852 | 41107.7 |
| helix-turn-helix domain-containing protein | NQ490_10895 | O31943 | - | 2336918 - 2337520 | 22937.0 |
| hypothetical protein | NQ490_10900 | Not Available | + | 2337684 - 2337926 | 9195.85 |
| aaa family atpase | NQ490_10905 | Q9KGG1 | + | 2338067 - 2339032 | 35305.5 |
| plasmid recombination protein | NQ490_10910 | P13925 | + | 2339247 - 2340401 | 44779.3 |
| hypothetical protein | NQ490_10915 | Not Available | + | 2340640 - 2342058 | 53453.6 |
| hypothetical protein | NQ490_10920 | Not Available | + | 2342246 - 2343688 | 54949.8 |
| cpbp family intramembrane metalloprotease | NQ490_10925 | Not Available | + | 2343860 - 2344429 | 21708.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.