Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hamp domain-containing histidine kinase | NQ490_10830 | O34989 | - | 2325426 - 2326814 | 51911.7 |
| response regulator transcription factor | NQ490_10835 | P94504 | - | 2326819 - 2327520 | 26001.7 |
| abc transporter atp-binding protein | NQ490_10840 | P42246 | + | 2327677 - 2328441 | 28063.2 |
| abc transporter permease | NQ490_10845 | Not Available | + | 2328438 - 2329163 | 26235.7 |
| abc transporter permease | NQ490_10850 | Not Available | + | 2329180 - 2329944 | 28241.1 |
| hypothetical protein | NQ490_10855 | Not Available | + | 2329949 - 2330245 | 10509.3 |
| anti-sigma factor | NQ490_10860 | Not Available | + | 2330256 - 2330738 | 17015.9 |
| response regulator | NQ490_10865 | P0AEV2 | + | 2330752 - 2331099 | 12750.5 |
| sigma-70 family rna polymerase sigma factor | NQ490_10870 | Not Available | + | 2331548 - 2331961 | 16096.4 |
| helix-turn-helix domain-containing protein | NQ490_10875 | Not Available | + | 2332512 - 2332742 | 8450.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.