Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cd1845 family protein | NQ490_10780 | Not Available | + | 2315185 - 2315484 | 10642.1 |
| putative dna binding domain-containing protein | NQ490_10785 | O50224 | - | 2315559 - 2316977 | 53742.0 |
| relaxase/mobilization nuclease domain-containing protein | NQ490_10790 | P03865 | + | 2317104 - 2318516 | 53521.1 |
| helix-turn-helix domain-containing protein | NQ490_10795 | Q6F9U5 | - | 2318739 - 2319095 | 13492.4 |
| response regulator transcription factor | NQ490_10800 | P32040 | + | 2319335 - 2320027 | 26183.5 |
| hamp domain-containing histidine kinase | NQ490_10805 | P23545 | + | 2320024 - 2321055 | 38257.6 |
| abc transporter atp-binding protein | NQ490_10810 | Q9WYI7 | + | 2321232 - 2321897 | 24439.5 |
| abc transporter permease | NQ490_10815 | Not Available | + | 2321912 - 2324326 | 88191.3 |
| hypothetical protein | NQ490_10820 | Not Available | - | 2324599 - 2324793 | 7411.94 |
| sigma-70 family rna polymerase sigma factor | NQ490_10825 | Not Available | + | 2324830 - 2325252 | 16523.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.