Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide abc transporter atp-binding protein | NQ490_10530 | Q50863 | + | 2259038 - 2260330 | 48151.9 |
| glycosyl transferase family 6 | NQ490_10535 | Q5JBG6 | + | 2260323 - 2261168 | 33307.0 |
| hypothetical protein | NQ490_10540 | Not Available | + | 2261161 - 2262129 | 38558.1 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | NQ490_10545 | Q8RC98 | - | 2262183 - 2263190 | 35234.2 |
| dna polymerase i | NQ490_10550 | O34996 | - | 2263207 - 2265720 | 91284.9 |
| trna dihydrouridine synthase dusb | NQ490_10555 | P37567 | + | 2265820 - 2266797 | 35227.0 |
| 5'-deoxynucleotidase | NQ490_10560 | Q87R72 | - | 2266794 - 2267396 | 22401.0 |
| yfho family protein | NQ490_10565 | O31582 | + | 2267491 - 2269854 | 87847.8 |
| rna-binding transcriptional accessory protein | NQ490_10570 | O31489 | + | 2269838 - 2271997 | 77966.7 |
| hypothetical protein | NQ490_10575 | Not Available | + | 2272433 - 2272654 | 7914.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.