Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | NQ490_10430 | Q8R9G2 | - | 2239295 - 2240776 | 53259.2 |
| asparagine synthase (glutamine-hydrolyzing) | NQ490_10435 | P54420 | - | 2240773 - 2242605 | 68910.5 |
| is200/is605 family transposase | NQ490_10440 | Q5WNW9 | + | 2242751 - 2242882 | 4752.74 |
| atp-grasp domain-containing protein | NQ490_10445 | H8L902 | + | 2244023 - 2245219 | 43791.8 |
| asparagine synthase (glutamine-hydrolyzing) | NQ490_10450 | P54420 | + | 2245263 - 2247110 | 70289.1 |
| Trna-arg | Not Available | Not Available | + | 2247206 - 2247279 | Not Available |
| Trna-his | Not Available | Not Available | + | 2247287 - 2247363 | Not Available |
| Trna-gln | Not Available | Not Available | + | 2247407 - 2247481 | Not Available |
| hypothetical protein | NQ490_10470 | Not Available | + | 2247566 - 2247877 | 11121.0 |
| degt/dnrj/eryc1/strs family aminotransferase | NQ490_10475 | Q6T1W6 | + | 2248018 - 2249133 | 40161.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.