Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hamp domain-containing histidine kinase | NQ490_10330 | O34638 | + | 2215291 - 2216637 | 48097.7 |
| hypothetical protein | NQ490_10335 | Not Available | + | 2216634 - 2217509 | 31651.8 |
| hypothetical protein | NQ490_10340 | Not Available | + | 2217535 - 2218965 | 51790.2 |
| hypothetical protein | NQ490_10345 | Not Available | + | 2218985 - 2220463 | 53554.1 |
| hypothetical protein | NQ490_10350 | Not Available | + | 2220489 - 2221922 | 52795.1 |
| nadp-specific glutamate dehydrogenase | NQ490_10355 | Q8RQP4 | + | 2222076 - 2223422 | 48337.9 |
| tetm/tetw/teto/tets family tetracycline resistance ribosomal protection protein | NQ490_10360 | Q00937 | - | 2223480 - 2226089 | 95009.2 |
| desulfoferrodoxin family protein | NQ490_10365 | Q30WF9 | + | 2226304 - 2226678 | 13690.6 |
| rubredoxin | NQ490_10370 | P56263 | + | 2226724 - 2226879 | 5439.29 |
| threonine ammonia-lyase | NQ490_10375 | Q74FW6 | + | 2227190 - 2228395 | 42829.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.