Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tryptophan-rich sensory protein | NQ490_10280 | Q8KBX2 | + | 2203603 - 2204067 | 16722.1 |
| aminoglycoside phosphotransferase family protein | NQ490_10285 | E8MF12 | - | 2204138 - 2205244 | 41175.5 |
| 1,3-beta-galactosyl-n-acetylhexosamine phosphorylase | NQ490_10290 | A9KIW5 | - | 2205257 - 2207428 | 83173.8 |
| hypothetical protein | NQ490_10295 | Not Available | - | 2207447 - 2207653 | 7160.23 |
| carbohydrate abc transporter permease | NQ490_10300 | O50501 | - | 2207663 - 2208553 | 32878.2 |
| sugar abc transporter permease | NQ490_10305 | O32155 | - | 2208566 - 2209450 | 32922.2 |
| carbohydrate abc transporter substrate-binding protein | NQ490_10310 | O50499 | - | 2209521 - 2210876 | 48538.6 |
| arac family transcriptional regulator | NQ490_10315 | P77402 | + | 2211290 - 2212138 | 32874.5 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | NQ490_10320 | P14002 | - | 2212201 - 2214471 | 81334.4 |
| response regulator transcription factor | NQ490_10325 | Q9F868 | + | 2214630 - 2215286 | 24888.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.