Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydratase activase | NQ490_10130 | Q93AM0 | - | 2173216 - 2174877 | 60277.2 |
| 2-hydroxyacyl-coa dehydratase family protein | NQ490_10135 | Q93AL9 | - | 2174874 - 2176163 | 48314.6 |
| mate family efflux transporter | NQ490_10140 | O34474 | - | 2176369 - 2177682 | 46587.8 |
| abc transporter atp-binding protein | NQ490_10145 | D4GP38 | + | 2177896 - 2179002 | 40530.3 |
| sugar abc transporter permease | NQ490_10150 | P94529 | + | 2179028 - 2179918 | 33236.2 |
| carbohydrate abc transporter permease | NQ490_10155 | O50501 | + | 2179931 - 2180800 | 32506.1 |
| extracellular solute-binding protein | NQ490_10160 | Q9KEE7 | + | 2180797 - 2182425 | 59457.9 |
| hypothetical protein | NQ490_10165 | Not Available | + | 2182499 - 2183326 | 29609.4 |
| hypothetical protein | NQ490_10170 | Not Available | + | 2183417 - 2183587 | 5868.25 |
| mmcq/yjbr family dna-binding protein | NQ490_10175 | P0AF51 | + | 2183605 - 2183955 | 13492.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.