Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | NQ490_10030 | Q08432 | + | 2140643 - 2141878 | 45823.5 |
| lyttr family dna-binding domain-containing protein | NQ490_10035 | P94514 | + | 2142049 - 2142753 | 26341.7 |
| ghkl domain-containing protein | NQ490_10040 | Not Available | + | 2142750 - 2144000 | 46206.6 |
| glycoside hydrolase family 2 protein | NQ490_10045 | T2KPJ7 | + | 2144178 - 2146097 | 72414.9 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | NQ490_10050 | P16084 | + | 2146251 - 2149226 | 106745.0 |
| mfs transporter | NQ490_10055 | P02921 | + | 2149332 - 2150921 | 58158.5 |
| glycerate kinase | NQ490_10060 | Q9X1S1 | - | 2150982 - 2152214 | 42473.7 |
| gntp family permease | NQ490_10065 | P71364 | - | 2152307 - 2153644 | 45930.1 |
| helix-turn-helix domain-containing protein | NQ490_10070 | P37047 | - | 2153713 - 2154849 | 42691.7 |
| mbl fold metallo-hydrolase | NQ490_10075 | Q57749 | - | 2154856 - 2155686 | 30180.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.