Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4968 domain-containing protein | NQ490_09930 | Q9F234 | - | 2116618 - 2119119 | 95092.5 |
| esterase family protein | NQ490_09935 | P23553 | + | 2119449 - 2120246 | 29512.7 |
| lyttr family dna-binding domain-containing protein | NQ490_09940 | P94514 | + | 2120421 - 2121131 | 26438.9 |
| ghkl domain-containing protein | NQ490_09945 | Not Available | + | 2121125 - 2122486 | 50969.8 |
| winged helix-turn-helix domain-containing protein | NQ490_09950 | Q52990 | + | 2122565 - 2122849 | 11101.9 |
| heme transporter ccmb | NQ490_09955 | Not Available | + | 2123011 - 2123343 | 12188.9 |
| atp-binding cassette domain-containing protein | NQ490_09960 | P71355 | + | 2123347 - 2125086 | 62769.7 |
| thiol reductant abc exporter subunit cydc | NQ490_09965 | Q57538 | + | 2125083 - 2126738 | 58920.2 |
| nitrous oxide-stimulated promoter family protein | NQ490_09970 | P25728 | + | 2126738 - 2127073 | 13204.3 |
| yban family protein | NQ490_09975 | P0AAR6 | + | 2127070 - 2127465 | 14519.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.