Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| zinc ribbon domain-containing protein | NQ490_09880 | Not Available | + | 2106153 - 2107088 | 32937.9 |
| phosphomethylpyrimidine synthase thic | NQ490_09885 | B9E2H5 | - | 2107156 - 2108466 | 47939.0 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | NQ490_09890 | P56904 | - | 2108492 - 2109298 | 27946.5 |
| thiamine phosphate synthase | NQ490_09895 | A9WDL8 | - | 2109363 - 2110007 | 22883.4 |
| hydroxyethylthiazole kinase | NQ490_09900 | Q97EL4 | - | 2109994 - 2110809 | 28568.5 |
| energy coupling factor transporter s component thiw | NQ490_09905 | Not Available | - | 2110823 - 2111341 | 17876.5 |
| helix-turn-helix domain-containing protein | NQ490_09910 | A4WG91 | - | 2111783 - 2113630 | 69795.2 |
| trap transporter large permease | NQ490_09915 | P40800 | - | 2113764 - 2115065 | 45590.1 |
| trap transporter small permease | NQ490_09920 | P44994 | - | 2115078 - 2115566 | 18076.0 |
| trap transporter substrate-binding protein | NQ490_09925 | P43020 | - | 2115580 - 2116599 | 37375.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.