Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| feob-associated cys-rich membrane protein | NQ490_09830 | Not Available | + | 2094491 - 2094691 | 6583.9 |
| metal-dependent transcriptional regulator | NQ490_09835 | P67711 | + | 2094793 - 2095170 | 14164.0 |
| mate family efflux transporter | NQ490_09840 | Q49VC5 | + | 2095339 - 2096688 | 48575.0 |
| duf308 domain-containing protein | NQ490_09845 | Not Available | - | 2096742 - 2097287 | 19650.9 |
| arac family transcriptional regulator | NQ490_09850 | P0ACI5 | - | 2097417 - 2098637 | 45890.4 |
| mfs transporter | NQ490_09855 | O34961 | + | 2098847 - 2100238 | 50487.3 |
| glycoside hydrolase family 2 protein | NQ490_09860 | T2KPJ7 | + | 2100260 - 2102467 | 82812.9 |
| trpb-like pyridoxal phosphate-dependent enzyme | NQ490_09865 | Q8Q001 | - | 2102559 - 2103941 | 50590.7 |
| hypothetical protein | NQ490_09870 | Not Available | - | 2104399 - 2104719 | 11760.0 |
| cation diffusion facilitator family transporter | NQ490_09875 | Q8L725 | - | 2104784 - 2105686 | 32425.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.