Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | NQ490_09780 | Not Available | - | 2084989 - 2086695 | 60417.6 |
| hypothetical protein | NQ490_09785 | Not Available | - | 2086892 - 2087956 | 38819.3 |
| rna polymerase sigma factor | NQ490_09790 | A0R2D4 | - | 2087946 - 2088434 | 18671.3 |
| pentapeptide repeat-containing protein | NQ490_09795 | Not Available | - | 2088543 - 2089124 | 21892.7 |
| acyltransferase family protein | NQ490_09800 | Not Available | - | 2089124 - 2090218 | 39770.9 |
| transcriptional repressor | NQ490_09805 | P71086 | - | 2090304 - 2090678 | 14025.1 |
| rubrerythrin family protein | NQ490_09810 | Q9AGG3 | + | 2090883 - 2091425 | 20434.1 |
| ferrous iron transport protein a | NQ490_09815 | Q57987 | + | 2091745 - 2091957 | 7586.48 |
| ferrous iron transport protein a | NQ490_09820 | Q7MV19 | + | 2092017 - 2092238 | 8179.21 |
| ferrous iron transport protein b | NQ490_09825 | Q6GDP8 | + | 2092283 - 2094463 | 78965.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.