Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| folate family ecf transporter s component | NQ490_09730 | A0Q1J7 | + | 2075793 - 2076383 | 21744.4 |
| sodium:alanine symporter family protein | NQ490_09735 | Q6LX42 | + | 2076555 - 2077898 | 47407.9 |
| hypothetical protein | NQ490_09740 | Not Available | - | 2077969 - 2078913 | 34598.5 |
| hypothetical protein | NQ490_09745 | Not Available | - | 2078948 - 2079487 | 20167.1 |
| hypothetical protein | NQ490_09750 | Not Available | - | 2079492 - 2080019 | 19531.9 |
| sigma-70 family rna polymerase sigma factor | NQ490_09755 | H8F0N6 | - | 2080016 - 2080549 | 20153.9 |
| exodeoxyribonuclease iii | NQ490_09760 | P37454 | - | 2080650 - 2081405 | 28884.1 |
| mate family efflux transporter | NQ490_09765 | O07940 | - | 2081427 - 2082782 | 48305.5 |
| abc transporter permease | NQ490_09770 | O31712 | - | 2082878 - 2084185 | 45752.0 |
| abc transporter atp-binding protein | NQ490_09775 | O31711 | - | 2084172 - 2084864 | 25492.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.